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SRX036772: Demonstration Project Reference Genome for Human Microbiome Project
1 ILLUMINA (Illumina Genome Analyzer II) run: 1.9M spots, 379.3M bases, 176.4Mb downloads

Design: Illumina sequencing of HMP Reference Genome for Escherichia coli MS 146-1 H_KT-146-1-0089515651 paired end RANDOM library
Submitted by: The Genome Center at Washington University School of Medicine in St. Louis (WUGSC)
Study: Demonstration Project Reference Genome for Human Microbiome Project
PRJNA47241 • SRP004996 • All experiments • All runs
show Abstracthide Abstract
This strain is being sequenced as a reference for the Demonstration Project "Effect of Crohn's Disease Risk Alleles on Enteric Microbiota" of the Human Microbiome Project (HMP).
Sample: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli MS 146-1
SAMN00189170 • SRS150852 • All experiments • All runs
Organism: Escherichia coli MS 146-1
Library:
Name: 2853155960
Instrument: Illumina Genome Analyzer II
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward barcode
Group tagBasecalls
ACTTGAACTTGA
TAGCTTTAGCTT
GCCAATGCCAAT
CGATGTCGATGT
TTAGGCTTAGGC
CAGATCCAGATC
ACAGTGACAGTG
GGCTACGGCTAC
TGACCATGACCA
CTTGTACTTGTA
ATCACGATCACG
GATCAGGATCAG
107  reverse

Runs: 1 run, 1.9M spots, 379.3M bases, 176.4Mb
Run# of Spots# of BasesSizePublished
SRR0889111,896,286379.3M176.4Mb2011-01-29

ID:
43947

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