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SRX036776: Demonstration Project Reference Genome for Human Microbiome Project
1 ILLUMINA (Illumina Genome Analyzer II) run: 3.8M spots, 761.7M bases, 351.4Mb downloads

Design: Illumina sequencing of HMP Reference Genome for Escherichia coli MS 187-1 H_KT-187-1-0089515615 paired end RANDOM library
Submitted by: The Genome Center at Washington University School of Medicine in St. Louis (WUGSC)
Study: Demonstration Project Reference Genome for Human Microbiome Project
PRJNA47269 • SRP005002 • All experiments • All runs
show Abstracthide Abstract
This strain is being sequenced as a reference for the Demonstration Project "Effect of Crohn's Disease Risk Alleles on Enteric Microbiota" of the Human Microbiome Project (HMP).
Sample: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli MS 187-1
SAMN00189176 • SRS150858 • All experiments • All runs
Organism: Escherichia coli MS 187-1
Library:
Name: 2853155960
Instrument: Illumina Genome Analyzer II
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward barcode
Group tagBasecalls
CAGATCCAGATC
TTAGGCTTAGGC
TGACCATGACCA
CGATGTCGATGT
GCCAATGCCAAT
GGCTACGGCTAC
TAGCTTTAGCTT
ATCACGATCACG
GATCAGGATCAG
ACAGTGACAGTG
ACTTGAACTTGA
CTTGTACTTGTA
107  reverse

Runs: 1 run, 3.8M spots, 761.7M bases, 351.4Mb
Run# of Spots# of BasesSizePublished
SRR0889153,808,251761.7M351.4Mb2011-01-29

ID:
43951

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