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SRX8585098: single-cell # 69 of Methanococcus EPD 09 of UE3 co-culture with Desulfovibrio at 1000 generation
1 ILLUMINA (NextSeq 500) run: 485,603 spots, 73M bases, 26.8Mb downloads

Design: Variant identification through sequencing of Genomic DNA collected from sorted single-cell # 69 of Methanococcus maripaludis from EPD 09 of UE3 co-culture with Desulfovibrio vulgaris after evolving for 1000 generation
Submitted by: Institute for Systems Biology
Study: Distribution of mutations in evolved syntrophic co-cultures of sulfate reducing bacteria Desulfovibrio vulgaris Hildenborough and methanogenic archaea Methanococcus maripaludis S2
PRJNA248017 • SRP042058 • All experiments • All runs
show Abstracthide Abstract
Synthetically established syntrophic cultures of Desulfovibrio vulgaris Hildenborough and Methanococcus maripaludis S2 were cultivated in two different evolution environments (shaking vs no-shaking) for 1000 generations. DNA samples were collected and subjected to whole genome sequencing to be able to identify variations accumulated during the evolution of syntrophy in both species.
Sample: Genomic DNA collected from sorted single-cell # 69 of Methanococcus maripaludis from EPD 09 of UE3 co-culture with Desulfovibrio vulgaris after evolving for 1000 generation
SAMN15315301 • SRS6876599 • All experiments • All runs
Organism: Methanococcus maripaludis S2
Library:
Name: single-cells-mmp-09-69
Instrument: NextSeq 500
Strategy: WGS
Source: GENOMIC SINGLE CELL
Selection: PCR
Layout: PAIRED
Runs: 1 run, 485,603 spots, 73M bases, 26.8Mb
Run# of Spots# of BasesSizePublished
SRR12056549485,60373M26.8Mb2020-06-19

ID:
11160517

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