Illumina HiSeq 2500 paired end sequencing of SAMD00211579 - SRA

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DRX207530: Illumina HiSeq 2500 paired end sequencing of SAMD00211579
1 ILLUMINA (Illumina HiSeq 2500) run: 3.4M spots, 1G bases, 558.6Mb downloads

Submitted by: SHIZUOKA

Study: Genomic analyses of self-transmissible plasmids obtained by exogenous plasmid capturing from environmental samples

PRJDB9503 • DRP007933 • All experiments • All runs

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Plasmids are mobile genetic elements to transmit various genes among different bacteria. However, it is still unclear which and how plasmid(s) spread these genes in natural environment. The objective of this study is to identify which conjugative plasmids are spread in natural environments. We successfully isolated >700 of self-transmissible plasmids from various natural environmental samples in Japan by exogenous plasmid capturing. Their nucleotide sequences are determined by NGSs.

Sample: RIp64

SAMD00211579 • DRS211679 • All experiments • All runs

Organism: Pseudomonas aeruginosa

Library:

Instrument: Illumina HiSeq 2500

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: NEBNext UltraII FS DNA Library Prep Kit

Spot descriptor:

1 forward152 reverse

Runs: 1 run, 3.4M spots, 1G bases, 558.6Mb

Run	# of Spots	# of Bases	Size	Published
DRR217195	3,359,207	1G	558.6Mb	2021-12-01

ID:: 18143977

SRA

Sequence Read Archive

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