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SRX21763887: Illumina MiSeq paired end sequencing of Streptococcus suis: Isolate 15194
1 ILLUMINA (Illumina MiSeq) run: 428,910 spots, 173.4M bases, 73.4Mb downloads

Design: Library preparation was performed using the KAPA HTP Library preparation kit and sequenced using ILLUMINA MiSeq
Submitted by: Amsterdam UMC, University of Amsterdam
Study: Streptococcus suis is an emerging underreported zoonotic pathogen in Europe: a systematic review and molecular epidemiology study
show Abstracthide Abstract
S. suis infection is not a notifiable disease in Europe, the total number of human infections is likely under-reported. Moreover, the number of published European zoonotic genomes is low, making it difficult to asses the molecular epidemiology of S. suis in the continent. We aimed to assess European zoonotic S. suis infections across the past three decades and its population structure. We sequenced 46 zoonotic S. suis isolates collected from European bacterial reference laboratories with Illumina WGS.
Sample:
SAMN32539699 • SRS18870401 • All experiments • All runs
Library:
Name: 15194
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 428,910 spots, 173.4M bases, 73.4Mb
Run# of Spots# of BasesSizePublished
SRR26047302428,910173.4M73.4Mb2023-09-13

ID:
29463419

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