Illumina MiSeq paired end sequencing of Streptococcus suis: Isolate S... - SRA

SRX15926229: Illumina MiSeq paired end sequencing of Streptococcus suis: Isolate STC92
1 ILLUMINA (Illumina MiSeq) run: 1.1M spots, 614.3M bases, 429.7Mb downloads

Design: DNA was prepared using Nextera Library Preparation Kit and the XT Index Kit v2 Set A and sequenced using Illumina MiSeq

Submitted by: Amsterdam UMC, University of Amsterdam

Study: Streptococcus suis outbreak in Thailand caused by an emerging zoonotic strain with acquired multi-drug resistance

PRJNA853715 • SRP383968 • All experiments • All runs

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The zoonotic pathogen S. suis caused an outbreak in Nakhon Ratchasima, Thailand with 19 confirmed cases. We characterized the outbreak through an epidemiological investigation combined with Illumina and Nanopore whole genome sequencing (WGS).

Sample:

SAMN29401330 • SRS13614573 • All experiments • All runs

Organism: Streptococcus suis

Library:

Name: STC92

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 1.1M spots, 614.3M bases, 429.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR19882913	1,111,942	614.3M	429.7Mb	2022-07-11

ID:: 22592799

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