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DRX045133: Illumina MiSeq paired end sequencing of SAMD00029796
1 ILLUMINA (Illumina MiSeq) run: 1.2M spots, 704.5M bases, 441.9Mb downloads

Submitted by: UT-VMS
Study: Whole genome sequencing of Streptococcus suis
show Abstracthide Abstract
Streptococcus suis is a major swine pathogen responsible for important economic losses to the swine industry worldwide. It is also an emerging zoonotic agent of a meningitis and streptococcal toxic shock-like syndrome. Since the recent recognition of the high prevalence of S. suis human disease in southeast and east Asia, the interest of the scientific community in this pathogen has significantly increased. In order to cause disease, S. suis must colonize the host, breach epithelial barriers, reach and survive in the host bloodstream, invade different organs, and cause exaggerated inflammation.In this project, we would like to analyze and compare in detail the S. suis isolates from pigs and porcine lesions by using NGS. This data can find solutions for the issues of S. suis.
Sample: Streptococcus suis serotype 2 ST28 capsule(-) -2014-800
SAMD00029796 • DRS033462 • All experiments • All runs
Library:
Name: SUT1329
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol:
Spot descriptor:
forward302  reverse

Runs: 1 run, 1.2M spots, 704.5M bases, 441.9Mb
Run# of Spots# of BasesSizePublished
DRR0500911,170,296704.5M441.9Mb2016-08-27

ID:
3010262

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