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SRX12633412: GSM5628275: GR1008; Limosilactobacillus fermentum; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 20.3M spots, 6.1G bases, 2.4Gb downloads

Submitted by: NCBI (GEO)
Study: Total RNAseq of Lactobacillus fermentum
show Abstracthide Abstract
We applied total RNA sequencing of Lactobacillus fermentum strain GR1008 and GR1009 and compare the differentially expressed genes. This study aimed to find out the underlying mechanims for the differential morphology of the two strains. Overall design: Comparative study of gene expression level of GR1008 and the morphotypic variant strain GR1009
Sample: GR1008
SAMN22328875 • SRS10586795 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA preparation was carried out using TRIzol Max Bacterial RNA Isolation Kit (Thermofisher, MA, USA) following manufacturer's instructions. The rRNA was then depleted from extracted RNA and the cDNA library was synthesized using random primers. The library was ligated with adaptors and filtered according to molecular weight
Experiment attributes:
GEO Accession: GSM5628275
Links:
Runs: 1 run, 20.3M spots, 6.1G bases, 2.4Gb
Run# of Spots# of BasesSizePublished
SRR1635593220,336,7666.1G2.4Gb2022-11-10

ID:
17175416

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