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SRX2163339: Whole genome shotgun sequencing of Campylobacter jejuni by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 533,875 spots, 237M bases, 135.2Mb downloads

External Id: EXT00215127
Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)
Study: Campylobacter Genome sequencing and assembly
PRJNA271861 • SRP051933 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of cultured Campylobacter jejuni as part of a joint Fera, Food Standards Agency, US Food and Drug Administration project.
Sample:
SAMN05762624 • SRS1691362 • All experiments • All runs
Organism: Campylobacter jejuni
Library:
Name: Campylobacter jejuni Nextera XT shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Campylobacter jejuni.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.8.5
demultiplexer10MiSeq Reporter2.3
Runs: 1 run, 533,875 spots, 237M bases, 135.2Mb
Run# of Spots# of BasesSizePublished
SRR4242487533,875237M135.2Mb2016-09-14

ID:
3158265

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