Whole genome shotgun sequencing of Campylobacter jejuni by Illumina M... - SRA

SRX2163375: Whole genome shotgun sequencing of Campylobacter jejuni by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 355,493 spots, 142.5M bases, 75.7Mb downloads

External Id: EXT00215232

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)

Study: Campylobacter Genome sequencing and assembly

PRJNA271861 • SRP051933 • All experiments • All runs

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Whole genome sequencing of cultured Campylobacter jejuni as part of a joint Fera, Food Standards Agency, US Food and Drug Administration project.

Sample:

SAMN05762675 • SRS1691397 • All experiments • All runs

Organism: Campylobacter jejuni

Library:

Name: Campylobacter jejuni Nextera XT shotgun

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for Campylobacter jejuni.

Spot descriptor:

1 forward251 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.8.5
demultiplexer	1	0	MiSeq Reporter	2.3

Runs: 1 run, 355,493 spots, 142.5M bases, 75.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR4242522	355,493	142.5M	75.7Mb	2016-09-14

ID:: 3158301

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