Whole genome Illumina MiSeq sequence of Campylobacter jejuni - SRA

SRX5961748: Whole genome Illumina MiSeq sequence of Campylobacter jejuni
1 ILLUMINA (Illumina MiSeq) run: 222,669 spots, 101.1M bases, 50.5Mb downloads

External Id: EXT00360074

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)

Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA

PRJNA278886 • SRP056445 • All experiments • All runs

show Abstracthide Abstract

The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.

Sample:

SAMN11948148 • SRS4870973 • All experiments • All runs

Organism: Campylobacter jejuni

Library:

Name: Nextera XT library SEQ000089565

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward251 reverse

Runs: 1 run, 222,669 spots, 101.1M bases, 50.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR9189602	222,669	101.1M	50.5Mb	2019-06-03

ID:: 7997254

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity