U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX5961742: Whole genome Illumina MiSeq sequence of Campylobacter jejuni
1 ILLUMINA (Illumina MiSeq) run: 416,279 spots, 193.1M bases, 106.8Mb downloads

External Id: EXT00359967
Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN11947922 • SRS4870967 • All experiments • All runs
Organism: Campylobacter jejuni
Library:
Name: Nextera XT library SEQ000090378
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward251  reverse

Runs: 1 run, 416,279 spots, 193.1M bases, 106.8Mb
Run# of Spots# of BasesSizePublished
SRR9189596416,279193.1M106.8Mb2019-06-03

ID:
7997248

Supplemental Content

Related information

Search details

See more...

Recent activity