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SRX3452839: Whole genome shotgun sequencing of FSIS11704562 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 204,365 spots, 96.9M bases, 55.2Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Campylobacter
PRJNA292668 • SRP063302 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN08141373 • SRS2741593 • All experiments • All runs
Organism: Campylobacter jejuni
Library:
Name: FSIS11704562 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11704562.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 204,365 spots, 96.9M bases, 55.2Mb
Run# of Spots# of BasesSizePublished
SRR6356248204,36596.9M55.2Mb2017-12-07

ID:
4811148

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