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SRX3587405: Whole genome shotgun sequencing of FSIS11706589 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 477,449 spots, 141.5M bases, 74.3Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Campylobacter
PRJNA292668 • SRP063302 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN08380169 • SRS2855850 • All experiments • All runs
Organism: Campylobacter jejuni
Library:
Name: FSIS11706589 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11706589.
Spot descriptor:
1  forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 477,449 spots, 141.5M bases, 74.3Mb
Run# of Spots# of BasesSizePublished
SRR6498571477,449141.5M74.3Mb2018-01-24

ID:
4972907

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