Whole genome shotgun sequencing of FSIS11808759 by Illumina MiSeq - SRA

SRX3893562: Whole genome shotgun sequencing of FSIS11808759 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 785,422 spots, 231.3M bases, 117.1Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: USDA-FSIS: Isolated strains of Campylobacter spp. genome sequencing

PRJNA287430 • SRP059786 • All experiments • All runs

show Abstracthide Abstract

Whole genome sequencing of Campylobacter isolates

Sample:

SAMN08873574 • SRS3131303 • All experiments • All runs

Organism: Campylobacter jejuni

Library:

Name: FSIS11808759 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS11808759.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 785,422 spots, 231.3M bases, 117.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR6950113	785,422	231.3M	117.1Mb	2018-04-05

ID:: 5347260

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