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SRX4082044: Whole genome shotgun sequencing of FSIS11809833 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 751,286 spots, 220.8M bases, 125.1Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Campylobacter
PRJNA292668 • SRP063302 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN09207369 • SRS3299270 • All experiments • All runs
Organism: Campylobacter jejuni
Library:
Name: FSIS11809833 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11809833.
Spot descriptor:
1  forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 751,286 spots, 220.8M bases, 125.1Mb
Run# of Spots# of BasesSizePublished
SRR7163766751,286220.8M125.1Mb2018-05-14

ID:
5567605

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