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SRX4277876: Whole genome shotgun sequencing of FSIS11810769 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 838,449 spots, 248.7M bases, 137.3Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Campylobacter
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN09462713 • SRS3443954 • All experiments • All runs
Library:
Name: FSIS11810769 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11810769.
Spot descriptor:
forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 838,449 spots, 248.7M bases, 137.3Mb
Run# of Spots# of BasesSizePublished
SRR7406304838,449248.7M137.3Mb2018-06-21

ID:
5765261

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