U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX5492833: Whole genome shotgun sequencing of FSIS11917635 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 464,762 spots, 137.2M bases, 69.7Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Campylobacter
PRJNA292668 • SRP063302 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN11082290 • SRS4462701 • All experiments • All runs
Organism: Campylobacter jejuni
Library:
Name: FSIS11917635 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11917635.
Spot descriptor:
1  forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 464,762 spots, 137.2M bases, 69.7Mb
Run# of Spots# of BasesSizePublished
SRR8696977464,762137.2M69.7Mb2019-03-07

ID:
7414906

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...