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SRX8182760: Whole genome shotgun sequencing of FSIS11927084 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 680,864 spots, 176.4M bases, 105.8Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Campylobacter
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN14739447 • SRS6541827 • All experiments • All runs
Library:
Name: FSIS11927084 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11927084.
Spot descriptor:
forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 680,864 spots, 176.4M bases, 105.8Mb
Run# of Spots# of BasesSizePublished
SRR11616606680,864176.4M105.8Mb2020-04-27

ID:
10666949

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