Whole genome shotgun sequencing of FSIS12029458 by Illumina MiSeq - SRA

SRX7974873: Whole genome shotgun sequencing of FSIS12029458 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 344,634 spots, 100.2M bases, 50.4Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: USDA-FSIS: Isolated strains of Campylobacter spp. genome sequencing

PRJNA287430 • SRP059786 • All experiments • All runs

show Abstracthide Abstract

Whole genome sequencing of Campylobacter isolates

Sample:

SAMN14430562 • SRS6359642 • All experiments • All runs

Organism: Campylobacter jejuni

Library:

Name: FSIS12029458 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS12029458.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 344,634 spots, 100.2M bases, 50.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR11396143	344,634	100.2M	50.4Mb	2020-03-23

ID:: 10410699

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity