Whole genome shotgun sequencing of FSIS12030090 by Illumina MiSeq - SRA

SRX8167096: Whole genome shotgun sequencing of FSIS12030090 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 557,109 spots, 164.3M bases, 81.3Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: USDA-FSIS: Isolated strains of Campylobacter spp. genome sequencing

PRJNA287430 • SRP059786 • All experiments • All runs

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Whole genome sequencing of Campylobacter isolates

Sample:

SAMN14681098 • SRS6528367 • All experiments • All runs

Organism: Campylobacter jejuni

Library:

Name: FSIS12030090 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS12030090.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 557,109 spots, 164.3M bases, 81.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR11600403	557,109	164.3M	81.3Mb	2020-04-23

ID:: 10644329

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Sequence Read Archive

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