Whole genome shotgun sequencing of FSIS12031185 by Illumina MiSeq - SRA

SRX8537849: Whole genome shotgun sequencing of FSIS12031185 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.2M spots, 342.8M bases, 168Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: USDA-FSIS: Isolated strains of Campylobacter spp. genome sequencing

PRJNA287430 • SRP059786 • All experiments • All runs

show Abstracthide Abstract

Whole genome sequencing of Campylobacter isolates

Sample:

SAMN15223726 • SRS6832805 • All experiments • All runs

Organism: Campylobacter jejuni

Library:

Name: FSIS12031185 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS12031185.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 1.2M spots, 342.8M bases, 168Mb

Run	# of Spots	# of Bases	Size	Published
SRR12004647	1,196,971	342.8M	168Mb	2020-06-12

ID:: 11095388

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