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SRX1977325: Whole genome shotgun sequencing of FSIS1607033 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 735,512 spots, 185.5M bases, 92.4Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Campylobacter
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN05440723 • SRS1585080 • All experiments • All runs
Library:
Name: FSIS1607033 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS1607033.
Spot descriptor:
forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 735,512 spots, 185.5M bases, 92.4Mb
Run# of Spots# of BasesSizePublished
SRR3953090735,512185.5M92.4Mb2016-07-26

ID:
2845651

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