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SRX2240729: Whole genome shotgun sequencing of FSIS1607835 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 562,433 spots, 144.4M bases, 74.5Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Campylobacter
PRJNA292668 • SRP063302 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN05900932 • SRS1742325 • All experiments • All runs
Organism: Campylobacter jejuni
Library:
Name: FSIS1607835 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS1607835.
Spot descriptor:
1  forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 562,433 spots, 144.4M bases, 74.5Mb
Run# of Spots# of BasesSizePublished
SRR4418309562,433144.4M74.5Mb2016-10-12

ID:
3287981

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