Format

Send to:

Choose Destination

SRX2775444: Whole genome shotgun sequencing of FSIS1700849 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 816,786 spots, 242.6M bases, 124.2Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Campylobacter
PRJNA292668 • SRP063302 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN06859106 • SRS2158740 • All experiments • All runs
Organism: Campylobacter jejuni
Library:
Name: FSIS1700849 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS1700849.
Spot descriptor:
1  forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 816,786 spots, 242.6M bases, 124.2Mb
Run# of Spots# of BasesSizePublished
SRR5494490816,786242.6M124.2Mb2017-05-02

ID:
4003417

Supplemental Content

Related information

Search details

See more...

Recent activity