Whole genome shotgun sequencing of FSIS21821223 by Illumina MiSeq - SRA

SRX3839530: Whole genome shotgun sequencing of FSIS21821223 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 710,664 spots, 210.2M bases, 110.4Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: USDA-FSIS: Isolated strains of Campylobacter spp. genome sequencing

PRJNA287430 • SRP059786 • All experiments • All runs

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Whole genome sequencing of Campylobacter isolates

Sample:

SAMN08786129 • SRS3086814 • All experiments • All runs

Organism: Campylobacter jejuni

Library:

Name: FSIS21821223 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS21821223.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 710,664 spots, 210.2M bases, 110.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR6888981	710,664	210.2M	110.4Mb	2018-03-23

ID:: 5277566

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Sequence Read Archive

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