Whole genome shotgun sequencing of FSIS21822701 by Illumina MiSeq - SRA

SRX5088675: Whole genome shotgun sequencing of FSIS21822701 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.2M spots, 339.5M bases, 189.7Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: USDA-FSIS: Isolated strains of Campylobacter spp. genome sequencing

PRJNA287430 • SRP059786 • All experiments • All runs

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Whole genome sequencing of Campylobacter isolates

Sample:

SAMN10517189 • SRS4100419 • All experiments • All runs

Organism: Campylobacter jejuni

Library:

Name: FSIS21822701 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS21822701.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 1.2M spots, 339.5M bases, 189.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR8272064	1,165,549	339.5M	189.7Mb	2018-12-03

ID:: 6865098

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Sequence Read Archive

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