Whole genome shotgun sequencing of FSIS22028140 by Illumina MiSeq - SRA

SRX8421683: Whole genome shotgun sequencing of FSIS22028140 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 581,635 spots, 168.8M bases, 84.4Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: USDA-FSIS: Isolated strains of Campylobacter spp. genome sequencing

PRJNA287430 • SRP059786 • All experiments • All runs

show Abstracthide Abstract

Whole genome sequencing of Campylobacter isolates

Sample:

SAMN15053333 • SRS6733150 • All experiments • All runs

Organism: Campylobacter jejuni

Library:

Name: FSIS22028140 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS22028140.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 581,635 spots, 168.8M bases, 84.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR11871976	581,635	168.8M	84.4Mb	2020-05-29

ID:: 10953448

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity