Whole genome shotgun sequencing of FSIS22028481 by Illumina MiSeq - SRA

SRX8628935: Whole genome shotgun sequencing of FSIS22028481 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 680,688 spots, 199M bases, 111.6Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: USDA-FSIS: Isolated strains of Campylobacter spp. genome sequencing

PRJNA287430 • SRP059786 • All experiments • All runs

show Abstracthide Abstract

Whole genome sequencing of Campylobacter isolates

Sample:

SAMN15395505 • SRS6916617 • All experiments • All runs

Organism: Campylobacter jejuni

Library:

Name: FSIS22028481 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS22028481.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 680,688 spots, 199M bases, 111.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR12104773	680,688	199M	111.6Mb	2020-06-28

ID:: 11216764

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity