Whole genome shotgun sequencing of FSIS31800225 by Illumina MiSeq - SRA

SRX3798749: Whole genome shotgun sequencing of FSIS31800225 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 889,798 spots, 262.1M bases, 132.4Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: USDA-FSIS: Isolated strains of Campylobacter spp. genome sequencing

PRJNA287430 • SRP059786 • All experiments • All runs

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Whole genome sequencing of Campylobacter isolates

Sample:

SAMN08719230 • SRS3050908 • All experiments • All runs

Organism: Campylobacter jejuni

Library:

Name: FSIS31800225 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS31800225.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 889,798 spots, 262.1M bases, 132.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR6843312	889,798	262.1M	132.4Mb	2018-03-15

ID:: 5233422

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Sequence Read Archive

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