Whole genome shotgun sequencing of FSIS31901576 by Illumina MiSeq - SRA

SRX5441939: Whole genome shotgun sequencing of FSIS31901576 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 220,950 spots, 63.5M bases, 35.7Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)

Study: USDA-FSIS: Isolated strains of Campylobacter spp. genome sequencing

PRJNA287430 • SRP059786 • All experiments • All runs

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Whole genome sequencing of Campylobacter isolates

Sample:

SAMN10957075 • SRS4419106 • All experiments • All runs

Organism: Campylobacter jejuni

Library:

Name: FSIS31901576 Nextera XT shotgun library

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for FSIS31901576.

Spot descriptor:

1 forward151 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 220,950 spots, 63.5M bases, 35.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR8643689	220,950	63.5M	35.7Mb	2019-02-27

ID:: 7352336

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