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SRX19628657: Nanopore sequencing of Campylobacter jejuni from human stool
1 OXFORD_NANOPORE (MinION) run: 40,775 spots, 82M bases, 71.8Mb downloads

Design: DNA extracted from bacterial culture and sequenced using MinION flow cell R10.4 with Ligation Sequencing Kit SQK-LSK112
Submitted by: Swiss Tropical and Public Health Institute
Study: Campylobacter jejuni subsp. jejuni genome sequencing for One Health Surveillance in Palestine
PRJNA942088 • SRP426543 • All experiments • All runs
show Abstracthide Abstract
Surveillance of Antimicrobial Resistance in the two food-borne pathogens Salmonella enterica and Campylobacter jejuni in the West Bank, Palestine. A cross-sectional study was conducted in the white meat production chain using isolates from chicken manure, chicken meat sold in markets, and faeces of asymptomatic farm workers.
Sample: Campylobacter jejuni isolated from feces of hospitalised gastroenteritis patient
SAMN33677859 • SRS16998252 • All experiments • All runs
Organism: Campylobacter jejuni
Library:
Name: Campylobacter_jejuni_Human_faeces_4_2022
Instrument: MinION
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Runs: 1 run, 40,775 spots, 82M bases, 71.8Mb
Run# of Spots# of BasesSizePublished
SRR2379652640,77582M71.8Mb2023-03-27

ID:
26926403

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