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SRX8452060: Draft genome of Burkholderia cepacia PC-17
1 ILLUMINA (Illumina MiniSeq) run: 3M spots, 1.4G bases, 905.9Mb downloads

Design: Sequencing library was prepared from gDNA
Submitted by: University of Southern Mississippi
Study: Functional analysis of phenazine biosynthesis genes in Burkholderia spp.
show Abstracthide Abstract
Phenazines contribute to competitiveness, biofilm formation, and virulence in the opportunistic pathogen Pseudomonas aeruginosa, but knowledge of their diversity, biosynthesis, and biological functions in Burkholderia is lacking. To bridge this gap, we focused on phenazine pathways of B. lata and related species of worldwide origin. Most Phz+ strains were members of the B. cepacia (Bcc) complex, but the capacity to synthesize phenazines was also present among isolates of the B. pseudomallei clade and the plant pathogen B. glumae. Our findings also suggest that the phenazine biosynthetic pathway in Burkholderia has a complex evolutionary history, which likely involved horizontal gene transfers among several distantly related groups of organisms.
Sample:
SAMN15079177 • SRS6754134 • All experiments • All runs
Library:
Name: USM3_I3_ACAGTG
Instrument: Illumina MiniSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 3M spots, 1.4G bases, 905.9Mb
Run# of Spots# of BasesSizePublished
SRR119054552,981,1981.4G905.9Mb2020-06-01

ID:
10988477

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