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Taxonomy browser (Methanococcus maripaludis)

Methanococcus maripaludis

Taxonomy ID: 39152 (for references in articles please use NCBI:txid39152)
current name
Methanococcus maripaludis Jones et al. 1984
type strain of Methanococcus maripaludis: ATCC:43000, DSM:2067, JCM:10722, NBRC:101831, OCM:175, personal::JJ
NCBI BLAST name: euryarchaeotes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Methanococcus deltae Corder et al. 1988
type strain of Methanococcus deltae: ATCC:35294, DSM:2771, OCM:151, personal::ΔRC
Lineage( full )
cellular organisms; Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales; Methanococcaceae; Methanococcus
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 1,031 718 32
Protein 36,276 25,688 -
Structure 71 52 -
Genome 1 1 -
Popset 2 2 -
GEO Datasets 446 134 -
PubMed Central 1,319 1,319 -
Gene 19,531 5,738 -
SRA Experiments 263 70 -
Protein Clusters 1,831 1,831 -
Identical Protein Groups 25,526 24,725 -
BioProject 57 30 -
BioSample 259 63 6
Assembly 29 24 -
PubChem BioAssay 3 1 -
Taxonomy 8 1 -

Comments and References:

Corder RE et al. (1983)
Corder, R.E., Hook, L.A., Larkin, J.M., and Frea, J.I. "Isolation and characterization of two new methane-producing cocci: Methanogenium olentangyi, sp. nov., and Methanococcus deltae, sp. nov." Arch. Microbiol. (1983) 134:28-32. [No PubMed record available.]
Jones WJ et al. (1983)
Jones, W.J., Paynter, M.J.B., and Gupta, R. "Characterization of Methanococcus maripaludis sp. nov., a new methanogen isolated from salt marsh sediment." Arch. Microbiol. (1983) 135:91-97. [No PubMed record available.]
Keswani J et al. (1996)
Keswani, J., Orkand, S., Premachandran, U., Mandelco, L., Franklin, M.J., and Whitman, W.B. "Phylogeny and taxonomy of mesophilic Methanococcus spp. and comparison of rRNA, DNA hybridization, and phenotypic methods." Int. J. Syst. Bacteriol. (1996) 46:727-735.
Poehlein A et al. (2018)
Poehlein, A., Heym, D., Quitzke, V., Fersch, J., Daniel, R., and Rother, M. "Complete genome sequence of the Methanococcus maripaludis type strain JJ (DSM 2067), a model for selenoprotein synthesis in Archaea." Genome Announc. (2018) 6:e00237-18.
VALIDATION LIST No. 14 (1984) (Methanococcus maripaludis)
VALIDATION LIST No. 14. Int. J. Syst. Bacteriol. (1984) 34:270-271.
VALIDATION LIST No. 25 (1988) (Methanococcus deltae)
VALIDATION LIST No. 25. Int. J. Syst. Bacteriol. (1988) 38:220-222.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Methanococcus maripaludis meta-databases BacDive
Methanococcus deltae Corder et al. 1988 taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0032930 organism-specific Genomes On Line Database
Methanococcus maripaludis culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
16 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Methanococcus maripaludis Jones, Paynter & Gupta, 1984 taxonomy/phylogenetic Ocean Biogeographic Information System
Methanococcus maripaludis Jones, Paynter & Gupta, 1984 taxonomy/phylogenetic World Register of Marine Species
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
A1 [1 1 9 1] A4 [1 1 7 1] A5 [1 1 5 1] C11 [1 1 17 1]
C12 [1 1 5 1] C13 [1 1 8 1] C14 [1 1 7 1] C5 strain C5 [1 3 28 8 2104 3 2] of Methanococcus maripaludis C5
C6 strain C6 [1 2 1 2 234 2] of Methanococcus maripaludis C6 C7 strain C7 [1 2 1 2 268 4] of Methanococcus maripaludis C7 C8 [1 1 9 1] C9 [1 1 11 1]
D1 [1 1 16 1] DSM 2067 [2 2 1815] DSM 2771 [1 1 15] DSM 7078 [1 1 7]
IB1 [1] JJ [1 259 25526 1031 2 1869 263 1] KA1 [1 1 5 1969] LL [24 8 20]
LL/S2 [2 8] Mic1c10 [1 1 1 1] Mic4c08 [1] NBRC 101831 [1 1]
NBRC 105638 [1 1 1] NBRC 105639 [1 1 1] NBRC 105821 [1 1 1] OS7mut1 [1 1 2]
OnlyE-A4 [1 1] OnlyE-A5 [1 1] RC [1 1 7 1] S1 [1 1 9 1]
S2 strain S2 [3 186 4 1817 4 2086 184 8] of Methanococcus maripaludis S2
isolate
MIC098Bin5 [1 7] genomic DNA [1]
culture-collection
DSM:2067 [1 5 1 1824] DSM:2771 [1 15 1] DSM:7078 [1 7 1] NBRC:105638 [2 3 1]
NBRC:105639 [1 1 1] NBRC:105821 [1 1 1]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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