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Organizing biological data

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Select item 10709741.

DNA library Preparation Strategies for Nanopore Technology to Reconstruct High Quality Bacterial Genomes

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Copenhagen

Accession:: PRJNA1070974
ID:: 1070974

Select item 9466762.

Propionibacterium freudenreichii for Scoary2 paper

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Agroscope

Accession:: PRJNA946676
ID:: 946676

Select item 9187833.

Propionibacterium freudenreichii

Propionibacterium freudenreichii MJ2 Genome sequencing and assembly

Taxonomy:: Propionibacterium freudenreichii

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Korea University

Accession:: PRJNA918783
ID:: 918783

Select item 8723374.

Transcriptional response of Propionibacterium freudenreichii subsp. freudenreichii DSM 20271 to oxygen

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Helsinki

Accession:: PRJNA872337
ID:: 872337

Select item 8435515.

Mudoger v1.0, genome recovery made easy

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Helmholtz Centre for Environmental Research - UFZ

Accession:: PRJNA843551
ID:: 843551

Select item 8092946.

Large-scale analysis of novel cellular microbes from the human gut biome

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB51075
ID:: 809294

Select item 7767967.

bacteria genome

Three bacteria genome, two from lactic bacteria and one from propionic bacterium

: Project data type: Other

Scope:: Monoisolate

INRA (INRA Rennes)

Accession:: PRJEB42478
ID:: 776796

Select item 7720958.

Bacteriophage-sensitive strains of Propionibacterium freudenreichii

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Copenhagen

Accession:: PRJNA772095
ID:: 772095

Select item 6937469.

Uncultured novel prokaryotic genomes associated with metabolic diseases such as T2D and T2D-related comorbidities

Recovery of novel prokaryotic genomes associated with metabolic diseases such as T2D and T2D-related comorbidities

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

EMG

Accession:: PRJEB37358
ID:: 693746

Select item 60136210.

MOCK_WGS_227+61

WGS of bacteria used in a diverse Mock

: Project data type: Other

Scope:: Monoisolate

BELGIAN NUCLEAR RESEARCH CENTER (SCK-CEN)

Accession:: PRJEB32402
ID:: 601362

Select item 57434211.

Genome sequencing and assembly of bacteria isolated from different environments

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Bioprox

Accession:: PRJNA574342
ID:: 574342

Select item 55912612.

The Unified Human Gastrointestinal Genome catalogue

A unified sequence catalogue of the human gut microbiome

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

EMG

Accession:: PRJEB33885
ID:: 559126

Select item 51637313.

Genomic_and_bacterial_blueprint_of_the_human_gastrointestinal_microbiota

: Project data type: Other

Scope:: Monoisolate

Wellcome Sanger Institute

Accession:: PRJEB23845
ID:: 516373

Select item 51580814.

Propionibacterium freudenreichii strain:T82

Propionibacterium freudenreichii strain:T82 Genome sequencing and assembly

Taxonomy:: Propionibacterium freudenreichii

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Warsaw University of Life Sciences - SGGW

Accession:: PRJNA515808
ID:: 515808

Select item 50358615.

Genomes of lactic acid bacteria

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Brigham Young University

Accession:: PRJNA503586
ID:: 503586

Select item 49187216.

Drakenstein12internal

: Project data type: Other

Scope:: Monoisolate

Wellcome Sanger Institute

Accession:: PRJEB21680
ID:: 491872

Select item 47658317.

Propionibacterium freudenreichii strain:CB129slpB

Propionibacterium freudenreichii strain:CB129slpB Genome sequencing and assembly

Taxonomy:: Propionibacterium freudenreichii

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

UFMG

Accession:: PRJNA476583
ID:: 476583

Select item 47310818.

Metagenomic and Metatranscriptomic Analysis of the Microbial Community in Swiss-type Maasdam Cheese During Ripening

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Institute of Biotechnology, University of Helsinki

Accession:: PRJEB23938
ID:: 473108

Select item 41350519.

Comparative genomics of Propionibacterium freudenreichii

De novo assembly of genomes from long sequence reads reveals uncharted territories of Propionibacterium freudenreichii

: Project data type: Other

Scope:: Monoisolate

Institute of Biotechnology, Univerity of Helsinki

Accession:: PRJEB14036
ID:: 413505

Select item 36039120.

ANA

Mutations and genomic islands explain the strain dependancy of sugar utilization among 21 strains of Propionibacterium freudenreichii

: Project data type: Other

Scope:: Monoisolate

Genoscope

Accession:: PRJEB8205
ID:: 360391

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