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Metagenome-Assembled Genome (MAG)

Identifiers
BioSample: SAMEA7852713; SRA: ERS5599193
Organism
uncultured bacterium
cellular organisms; Bacteria; environmental samples
Attributes
collection datenot provided
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
environmental mediumfaeces
geographic locationChina
investigation typemetagenome-assembled genome
isolation sourcehuman gut
project nameHuman gut MAGs
sample nameERR1190536-bin.16
ENA first public2021-01-25
ENA last update2021-01-25
ENA-CHECKLISTERC000047
External IdSAMEA7852713
INSDC center aliasEMG
INSDC center nameEMG
INSDC first public2021-01-25T17:28:43Z
INSDC last update2021-01-25T09:00:03Z
INSDC statuspublic
Submitter IdERR1190536-bin.16
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwarespades_v3.11.1
binning parametersdefault
binning softwareMetaWRAP v1.1
broker nameEMG broker account, EMBL-EBI
completeness score100
completeness softwareCheckM v1.0.11
contamination score1.69
geographic location (latitude)not provided
geographic location (longitude)not provided
metagenomic sourcehuman gut metagenome
sample derived fromERS1015611
sequencing methodIllumina HiSeq 2500
taxonomic identity markermulti-marker approach
Description

This sample represents a MAG from the metagenomic run ERR1190536

BioProject
PRJEB37358 Uncultured novel prokaryotic genomes associated with metabolic diseases such as T2D and T2D-related comorbidities
Retrieve all samples from this project

Submission
EBI; 2021-01-29
Accession:
SAMEA7852713
ID:
17701800

BioProject Nucleotide

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