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Links from GEO DataSets

Items: 7

1.

Mapping the Burkholderia cenocepacia niche response via high-throughput sequencing

(Submitter supplied) Transcriptional profiling of RNA-seq data from two Burkholderia species grown under conditions mimicking the cystic fibrosis lung and the soil environment
Organism:
Burkholderia cenocepacia
Type:
Expression profiling by high throughput sequencing
Platform:
GPL9702
8 Samples
Download data: TXT, XLS
Series
Accession:
GSE19115
ID:
200019115
2.

Identification of potential therapeutic targets for Burkholderia cenocepacia by comparative transcriptomics

(Submitter supplied) [1] Transcription profiling of one Burkholderia cenocepacia clinical isolate, J2315, versus a soil isolate, HI2424, in conditions mimicking CF sputum [2] Transcription profiling of Burkholderia cenocepacia isolates J2315 and HI2424 in media mimicking CF sputum or the soil environment
Organism:
Burkholderia cenocepacia
Type:
Expression profiling by array
Platform:
GPL8475
8 Samples
Download data: TXT
Series
Accession:
GSE15817
ID:
200015817
3.

Expression data from Burkholderia multivorans mucoid and nonmucoid isolates

(Submitter supplied) Burkholderia multivorans comprises opportunistic bacteria infecting hosts such as cystic fibrosis (CF) patients. Bcc long-term infection of CF patient airways has been associated with emergence of phenotypic variation including the mucoid-to-nonmucoid colony morphotype. Here we studied three Burkholderia multivorans clonal isolates (mucoid D2095 (BM11L), and nonmucoid D2214G and D2214P) and a laboratory nonmucoid variant (BM11L-nmv1) obtained under prolonged stationary phase. more...
Organism:
Burkholderia multivorans; Burkholderia multivorans ATCC 17616; Burkholderia cenocepacia J2315
Type:
Expression profiling by array
Platform:
GPL13356
12 Samples
Download data: CEL
Series
Accession:
GSE111467
ID:
200111467
4.

Burkholderia cepacia complex and cystic fibrosis (CF) patients

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Burkholderia cenocepacia J2315; Burkholderia multivorans; Burkholderia multivorans ATCC 17616
Type:
Expression profiling by array; Other
Platform:
GPL13356
10 Samples
Download data: CEL
Series
Accession:
GSE30568
ID:
200030568
5.

Hybridization of Burkholderia multivorans D2095 and D2214 genomic DNA

(Submitter supplied) Burkholderia cepacia complex (Bcc) comprises opportunistic bacteria infecting hosts such as cystic fibrosis (CF) patients. Bcc long-term infection of CF patient airways has been associated with emergence of phenotypic variation. Here we studied two Burkholderia multivorans clonal isolates (D2095 and D2214) displaying different morphotypes from a chronically infected CF patient in order to evaluate traits development during lung infection. more...
Organism:
Burkholderia cenocepacia J2315; Burkholderia multivorans; Burkholderia multivorans ATCC 17616
Type:
Other
Platform:
GPL13356
4 Samples
Download data: CEL, TXT
Series
Accession:
GSE30402
ID:
200030402
6.

Expression data from Burkholderia multivorans cystic fibrosis clinical isolates

(Submitter supplied) Burkholderia cepacia complex (Bcc) comprises opportunistic bacteria infecting hosts such as cystic fibrosis (CF) patients. Bcc long-term infection of CF patient airways has been associated with emergence of phenotypic variation. Here we studied two Burkholderia multivorans clonal isolates (D2095 and D2214) displaying different morphotypes from a chronically infected CF patient in order to evaluate traits development during lung infection.
Organism:
Burkholderia cenocepacia J2315; Burkholderia multivorans; Burkholderia multivorans ATCC 17616
Type:
Expression profiling by array
Platform:
GPL13356
6 Samples
Download data: CEL
Series
Accession:
GSE28306
ID:
200028306
7.

s54 -dependent response to nitrogen limitation and virulence in Burkholderia cenocepacia H111

(Submitter supplied) Members of the genus Burkholderia are versatile bacteria capable of colonizing highly diverse environmental niches. In this study, we investigated the global response of the opportunistic pathogen Burkholderia cenocepacia H111 to nitrogen limitation at the transcript and protein expression level. In addition to a classical response to nitrogen starvation, including the activation of glutamine synthetase, PII proteins and the two component regulatory system ntrBC, B. more...
Organism:
Burkholderia cenocepacia H111
Type:
Expression profiling by high throughput sequencing
Platform:
GPL16128
5 Samples
Download data: TXT
Series
Accession:
GSE66328
ID:
200066328
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Supplemental Content

db=gds|term=|query=78|qty=6|blobid=MCID_66524a29e795547e5f6b0931|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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