GEO help: Mouse over screen elements for information.
Status
Public on Feb 05, 2008
Title
RTSF Lactobacillus reuteri 2.3K v1.0
Technology type
spotted oligonucleotide
Distribution
non-commercial
Organism
Limosilactobacillus reuteri Manufacturer
Michigan State University Research Technology Support Facility
Manufacture protocol
Oligos arrayed in low volume Greiner 384 well plates in 3X SSC at a final concentration of 30uM.
Support
glass
Coating
Corning UltraGAPS (aminosilane)
Contributor(s)
Landgraf J Submission date
Jan 11, 2008
Last update date
Feb 05, 2008
Contact name
Robert Britton
E-mail(s)
rbritton@msu.edu Phone
517-355-6463 ext 1601
Organization name
Michigan State University
Department
Microbiology and Molecular Genetics
Street address
6144 BPS Building Michigan State University
City
East Lansing
State/province
MI
ZIP/Postal code
48824
Country
USA
Samples (50)
GSM256843 , GSM256844 , GSM256845 , GSM256846 , GSM256847 , GSM256848
GSM256849 ,
GSM256850 ,
GSM256851 ,
GSM256852 ,
GSM256853 ,
GSM256854 ,
GSM256855 ,
GSM256856 ,
GSM256857 ,
GSM256858 ,
GSM256859 ,
GSM256860 ,
GSM256861 ,
GSM256862 ,
GSM265405 ,
GSM265406 ,
GSM265407 ,
GSM265408 ,
GSM265409 ,
GSM265410 ,
GSM605666 ,
GSM605667 ,
GSM605668 ,
GSM605669 ,
GSM605670 ,
GSM605671 ,
GSM605672 ,
GSM605673 ,
GSM605674 ,
GSM605675 ,
GSM605676 ,
GSM605677 ,
GSM605678 ,
GSM605679 ,
GSM605680 ,
GSM605681 ,
GSM605682 ,
GSM605683 ,
GSM1312957 ,
GSM1312958 ,
GSM1312959 ,
GSM1312960 ,
GSM1312961 ,
GSM1312962 Series (5)
GSE10155 Lactobacillus reuteri ATCC 55730: Before vs after exposure to 0.5% bile.
GSE10495 Global transcriptome analysis of Lactobacillus reuteri in sourdough fermentation.
GSE24570 Comparison of gene expression of L. reuteri ATCC 55730 at different growth phase in LDMIII medium
GSE24572 Lactobacillus reuteri strains at different growth phases
GSE54324 Gene expression comparison of L. reuteri DSM 17938 and pocR mutant
Data table header descriptions ID DESCRIPTION gene description
GeneID sequence identifier of ORF used to design oligonucleotide probe
SEQUENCE
Data table ID DESCRIPTION GeneID SEQUENCE lr0003
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
lr0003
CACCACTTCTTAGCGTAATTCCAGCACAATTGTTGGCTTACTACACTAGTCTTGGTAAGG
lr0004
ATP-depenullent clp protease ATP-binulling subunit clpE
lr0004
TTCCCGAAAAGCTTGCTAACAAGGAAATTATCCGGCTCGATGTTGTTTCCTTAGTTCAAG
lr0006
lr0006
CACCTTATAAATTTGGAAGATCGTGACGTAACTAATCCCCTCACCGCCACGCTTGATAAT
lr0007
LSU ribosomal protein L32P
lr0007
ATCAAGTTAAATGTACCTGGCCTTACTCCTTGCCCAAACTGTGGTGAACTTCGCAAGTCC
lr0008
Thiamin pyrophosphokinase (EC 2.7.6.2)
lr0008
CATAAGAAGTACCTGGCCTTTGTCAATCTTACTCCTGTTCGAGGCCTTACGTTAAAAGAC
lr0011
Cell division protein ftsW
lr0011
CGACAGGTTATTACCCAGTTGGTTTGGTATGCGGTTGGAACAATCCTTATTATTGTCATT
lr0012
lr0012
GTGAAGTTGTAACCGATAATGAACGTTTCAAAGCAATGCTGATAAGTGACCAGAGCGAAT
lr0013
lr0013
AATGTTGCTAAGGGTGCTGGTGAAATGTTAGAACGGATGCAAAAGACTGAACGAAAGAAG
lr0014
S1 RNA binulling domain
lr0014
GGCATAAGCAAGGGGCAGTTTAAACGTGCTATTGGGCATTTGCTTAAAGAGAAATTAGTA
lr0015
lr0015
TAATCCAATGGAAATGATTGATCACCAGTATACCTTTAACCAACCACCTGCACCGGTAAT
lr0016
DNA topoisomerase I (EC 5.99.1.2)
lr0016
AACCAGAGGAATACTGGACAATTGATGCTATTTCAAGAAGGGCAAAGAAGAATTCAAGGC
lr0017
SIGNAL RECOGNITION PARTICLE, SUBUNIT FFH/SRP54
lr0017
TAAGTTTGTCGGTGAAGGGGAAAAGATGGAGGATCTTGATGTCTTTCACCCTGACCGGAT
lr0018
ATP-NAD kinase (EC 2.7.1.23)
lr0018
CAGTTTCGTATCCTCTACTTGCTATGAAGGCTACTTATTCTGATGGGCAGATAGAGAATT
lr0020
ABC transporter ATP-binulling protein uup
lr0020
GCCCGCTCACCTTTATTTATGGGATGAGCCGCTAAATTATCTTGATACCTATAATCAGCA
lr0021
GTP pyrophosphokinase (EC 2.7.6.5) / Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)
lr0021
AACCCTTGAAATTTATGCTCCAATTGCGGATCGCTTGGGTATCAGTACTATTAAGTGGGAA
lr0022
Sucrose transport protein
lr0022
ATCGCCTTCTACGTTGGGGCAGCCTTGTTAGTTGCTACTAGTTTATTCACAGTTCTCCCG
lr0023
lr0023
GGAAGCTATATCAACTATTTACGCCAATTGAGCAGGATTTGAAGCACCCACCGATAATTA
lr0024
Amino acid permease
lr0024
ATTGTTGGTGCTGCAGTATTGATTCTAGCAGTCACTGTATACCTTGTTCGGCATGGTTTT
lr0025
Chloride channel protein
lr0025
GACCATCAATTCAACTTGGGGCAACAATTGGGCAAGGAGTAGAGGAAAAGGCCAAAGTAG
lr0026
Amino acid permease
lr0026
GCAGTAGGGGTATTTGTTCCATTTACTTTATCGCAATCTGGGATGATTATTCACTGGCTT
1910 195 Kbytes .Supplementary data files not provided
Less...
More...