 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Sep 30, 2009 |
| Title |
Bacillus cereus Bc14579 - 1st design |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Bacillus cereus ATCC 14579 |
| Manufacturer |
Agilent |
| Manufacture protocol |
Agilent manufacture protocol.
Agilent uses its inkjet technology to print oligos onto glass slides.
|
| Support |
glass |
| |
|
| |
|
| Contributor(s) |
Moezelaar R, Abee T, Molenaar D, van der Voort M, van Schaik W |
| Submission date |
Nov 20, 2008 |
| Last update date |
Sep 30, 2009 |
| Contact name |
Maarten Mols |
| Organization name |
Wageningen University
|
| Department |
ATV
|
| Lab |
Food Microbiology
|
| Street address |
Bomenweg 2
|
| City |
Wageningen |
| ZIP/Postal code |
6703 HD |
| Country |
Netherlands |
| |
|
| Samples (24)
|
GSM378210, GSM378211, GSM378212, GSM378213, GSM378214, GSM378215
GSM378216, GSM378217, GSM378218, GSM378219, GSM378220, GSM378221, GSM378222, GSM378223, GSM378230, GSM378231, GSM378232, GSM378233, GSM378234, GSM378235, GSM378236, GSM378237, GSM378238, GSM378239
|
| Series (1) |
| GSE15140 |
Transcriptomic and physiological responses of Bacillus cereus to organic and inorganic acid down-shocks |
|
| Data table header descriptions |
| ID |
|
| Row |
Position of probe on array grid, row |
| Col |
Position of probe on array grid, column |
| SEQUENCE |
Sequence of probe |
| ControlType |
-1; negative control spot, 1; positive control spot, 0; sample probe no control |
| ProbeName |
Name of the probe |
| ORF |
Bacillus cereus ATCC 14579 locus tag |
| SPOT_ID |
Alternative probe name |
| Data table |
| ID |
Row |
Col |
SEQUENCE |
ControlType |
ProbeName |
ORF |
SPOT_ID |
| 1 |
1 |
1 |
ATCATCGTAGCTGGTCAGTGTATCCTTTTTTTTTTATCATCGTAGCTGGTCAGTGTATCC |
1 |
Pro25G_T10_Pro25G |
|
--BrightCorner |
| 2 |
1 |
2 |
GCTAGCGAAAGCTAGCTTTTCGATCGGAAACGATCGTTTTCCAGTGACGAAAGTCACTGG |
-1 |
(-)3xSLv1 |
|
--3xSLv1 |
| 3 |
1 |
3 |
GCGCTAAATTTATTACAAGCGTCTAGTTCATTGCCTTTCATTGCACCAGTAGTAAATTAC |
0 |
BC1BC0759#1 |
BC0759 |
|
| 4 |
1 |
4 |
TTCGTGAATCTTTTGGAATAACGCAAGAGAAATATGTAGGAAAAACACTAGAAAGAGGTT |
0 |
BC1BC2140#2 |
BC2140 |
|
| 5 |
1 |
5 |
TATCAACAAAGTTAGTAGTAGCAATCGGTATTGGAGCAGCATTATACGGGATATTAGGAC |
0 |
BC1BC2624#1 |
BC2624 |
|
| 6 |
1 |
6 |
AAACACGTATATGTAGATTGGAATGATGAGACGTTAACACGCTTAAAGTTCGATCTAGCT |
0 |
BC1BC0360#1 |
BC0360 |
|
| 7 |
1 |
7 |
GCATTAGTATGGGGAGCAAATTATACAATAGGAAAGTATGGAGTGGCATATATGTCATCC |
0 |
BC1BC3038#2 |
BC3038 |
|
| 8 |
1 |
8 |
ATCATCGTAGCTGGTCAGTGTATCCGGTCAGTGTATCCAGTTTCTCCGAATTTTT |
1 |
Pro25G_EQCP1_T5 |
|
--QC_Fusion |
| 9 |
1 |
9 |
TTGTGGTATACCTATGGTTTTACCAGCTACAATTGGTTAACAAAACCAACATTAAATGGT |
0 |
BC1BC5081#2 |
BC5081 |
|
| 10 |
1 |
10 |
CCCTTATTAGGAAAACATTATTATCCTCACGGCGTTGAATATGGTGATGATGAGACTTTC |
0 |
BC1BC3938#1 |
BC3938 |
|
| 11 |
1 |
11 |
TTATTACATCAAGTATCGCTGTCCTTCTATTAGTTGGTAGTCTTGCACTTGTACCAGTTA |
0 |
BC1BC5435#2 |
BC5435 |
|
| 12 |
1 |
12 |
ACACTTTATGTAACCTATTAGCAAAAGCAGGGTACGATGTATCTCGTGAGTACTACATTA |
0 |
BC1BC5364#2 |
BC5364 |
|
| 13 |
1 |
13 |
CAAGAAGTTATGGGTAATATCGAATTCGAAACAGACTTAACGAACCCTGATTTTGCAAAA |
0 |
BC1BC2328#2 |
BC2328 |
|
| 14 |
1 |
14 |
TACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGGAATTG |
0 |
BC1BC1172#2 |
BC1172 |
|
| 15 |
1 |
15 |
ATCATCGTAGCTGGTCAGTGTATCCGGTCAGTGTATCCAGTTTCTCCGAATTTTT |
1 |
Pro25G_EQCP1_T5 |
|
--QC_Fusion |
| 16 |
1 |
16 |
TTCTTTGAAACACACCAAGCCATTTCGTATACTTTGCAAAATATAGTTGAGCAATGTAAA |
0 |
BC1BC1557#1 |
BC1557 |
|
| 17 |
1 |
17 |
CAAGCTTGTCTTCTGGTGGTACAGCATGGAATAGTCCATATTACTATGCCTCTTATATAA |
0 |
BC1BC3761#2 |
BC3761 |
|
| 18 |
1 |
18 |
ATTACCAACTGCTATTATTGCTTCTATTACACTTGTACATGAAGTCGTAACGTTCATGCA |
0 |
BC1BC5030#1 |
BC5030 |
|
| 19 |
1 |
19 |
TTTTATACGCTATGCCTGTAGATACGGATGAGCAATTACAATACCGAATTACATTTCCTG |
0 |
BC1BC1464#2 |
BC1464 |
|
| 20 |
1 |
20 |
AATTAGAGATTACGGAGCCAGATGGAAGTGTATCAACGTTTACAAAAGTGAAAGGTAAAG |
0 |
BC1BC1219#2 |
BC1219 |
|
Total number of rows: 10807
Table truncated, full table size 992 Kbytes.
| Supplementary data files not provided |
|
|
|
|
 |
Less...
More...