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Status
Public on Dec 11, 2009
Title
EMBL Mycoplasma pneumoniae Operon Oligonucleotide Array
Technology type
spotted oligonucleotide
Distribution
non-commercial
Organism
Mycoplasmoides pneumoniae M129 Manufacturer
EMBL Genomic Core Facility
Manufacture protocol
A custom DNA array has been designed consisting of 688 70mers representing 688 annotated ORFs. The Mycoplasma pneumoniae array consists of oligos (70 bases, amino linker) spotted in the array four times each. The design and synthesis of the 688 oligos (probes) was performed by Operon and the spotting was done in EMBL Genomic Core Facility.
Submission date
Dec 17, 2008
Last update date
Dec 11, 2009
Contact name
Marc Güell
E-mail(s)
marc.guell@crg.es Organization name
Centre for Genomic Regulation
Department
Systems Biology
Lab
Design of Biological Systems
Street address
C/ Dr.Aiguader 88
City
Barcelona
ZIP/Postal code
08003
Country
Spain
Samples (252)
GSM351798 , GSM351799 , GSM351800 , GSM351801 , GSM351802 , GSM351803
GSM351804 ,
GSM351805 ,
GSM351806 ,
GSM351807 ,
GSM351808 ,
GSM351809 ,
GSM351810 ,
GSM351811 ,
GSM351812 ,
GSM351813 ,
GSM351814 ,
GSM351815 ,
GSM351816 ,
GSM351817 ,
GSM351818 ,
GSM351819 ,
GSM351820 ,
GSM351821 ,
GSM351822 ,
GSM351823 ,
GSM351824 ,
GSM351825 ,
GSM351826 ,
GSM351827 ,
GSM351828 ,
GSM351829 ,
GSM351830 ,
GSM351831 ,
GSM351832 ,
GSM351833 ,
GSM351834 ,
GSM351835 ,
GSM351836 ,
GSM351837 ,
GSM351838 ,
GSM351839 ,
GSM351840 ,
GSM351841 ,
GSM351842 ,
GSM351843 ,
GSM351844 ,
GSM351845 ,
GSM351846 ,
GSM351847 ,
GSM351848 ,
GSM351849 ,
GSM351850 ,
GSM351851 ,
GSM351852 ,
GSM351853 ,
GSM351854 ,
GSM351855 ,
GSM351856 ,
GSM351857 ,
GSM351858 ,
GSM351859 ,
GSM351860 ,
GSM351861 ,
GSM351862 ,
GSM351863 ,
GSM351864 ,
GSM351865 ,
GSM351866 ,
GSM351867 ,
GSM351868 ,
GSM351869 ,
GSM351870 ,
GSM351871 ,
GSM351872 ,
GSM351873 ,
GSM351874 ,
GSM351875 ,
GSM351876 ,
GSM351877 ,
GSM351878 ,
GSM351879 ,
GSM351880 ,
GSM351881 ,
GSM351882 ,
GSM351883 ,
GSM351884 ,
GSM351885 ,
GSM351886 ,
GSM351887 ,
GSM351888 ,
GSM351889 ,
GSM351890 ,
GSM351891 ,
GSM351892 ,
GSM351893 ,
GSM351894 ,
GSM351895 ,
GSM351896 ,
GSM351897 ,
GSM351898 ,
GSM351899 ,
GSM351900 ,
GSM351901 ,
GSM351902 ,
GSM351903 ,
GSM351904 ,
GSM351905 ,
GSM351906 ,
GSM351907 ,
GSM351908 ,
GSM351909 ,
GSM351910 ,
GSM351911 ,
GSM351912 ,
GSM351913 ,
GSM351914 ,
GSM351915 ,
GSM351916 ,
GSM351917 ,
GSM351918 ,
GSM351919 ,
GSM351920 ,
GSM351921 ,
GSM351922 ,
GSM351923 ,
GSM351924 ,
GSM351925 ,
GSM351926 ,
GSM351927 ,
GSM351928 ,
GSM351929 ,
GSM351930 ,
GSM351931 ,
GSM351932 ,
GSM351933 ,
GSM351934 ,
GSM351935 ,
GSM351936 ,
GSM351937 ,
GSM351938 ,
GSM351939 ,
GSM351940 ,
GSM351941 ,
GSM351942 ,
GSM351943 ,
GSM351944 ,
GSM351945 ,
GSM351946 ,
GSM351947 ,
GSM351948 ,
GSM351949 ,
GSM351950 ,
GSM351951 ,
GSM351952 ,
GSM351953 ,
GSM351954 ,
GSM351955 ,
GSM351956 ,
GSM351957 ,
GSM351958 ,
GSM351959 ,
GSM351960 ,
GSM351961 ,
GSM351962 ,
GSM351963 ,
GSM351964 ,
GSM351965 ,
GSM351966 ,
GSM351967 ,
GSM351968 ,
GSM351969 ,
GSM351970 ,
GSM351971 ,
GSM351972 ,
GSM351973 ,
GSM351974 ,
GSM351975 ,
GSM351976 ,
GSM351977 ,
GSM351978 ,
GSM351979 ,
GSM351980 ,
GSM351981 ,
GSM351982 ,
GSM351983 ,
GSM351984 ,
GSM351985 ,
GSM351986 ,
GSM351987 ,
GSM351988 ,
GSM351989 ,
GSM351990 ,
GSM351991 ,
GSM351992 ,
GSM351993 ,
GSM351994 ,
GSM351995 ,
GSM351996 ,
GSM351997 ,
GSM351998 ,
GSM351999 ,
GSM352000 ,
GSM352001 ,
GSM352002 ,
GSM352003 ,
GSM352004 ,
GSM352005 ,
GSM352006 ,
GSM352007 ,
GSM352008 ,
GSM352009 ,
GSM352010 ,
GSM352011 ,
GSM352012 ,
GSM352013 ,
GSM352014 ,
GSM352015 ,
GSM352016 ,
GSM352017 ,
GSM352018 ,
GSM352019 ,
GSM352020 ,
GSM352021 ,
GSM352022 ,
GSM352023 ,
GSM352024 ,
GSM352025 ,
GSM352026 ,
GSM352027 ,
GSM352028 ,
GSM352029 ,
GSM352030 ,
GSM352031 ,
GSM352032 ,
GSM352033 ,
GSM352034 ,
GSM352035 ,
GSM352036 ,
GSM352037 ,
GSM352038 ,
GSM352039 ,
GSM352040 ,
GSM352041 ,
GSM352042 ,
GSM352043 ,
GSM352044 ,
GSM352045 ,
GSM352046 ,
GSM352047 ,
GSM352048 ,
GSM352049 Series (2)
GSE14015 Mycoplasma pneumoniae expression profiling
GSE14019 Transcriptome/Expression analysis in Mycoplasma pneumoniae
Data table header descriptions ID ORF Locus tag
GENE Gene name
STRAND +/- strand
SEQUENCE Oligonucleotide sequence
Data table ID ORF GENE STRAND SEQUENCE MPN001|dnaN(+)
MPN001 dnaN
+
CTTGACGTTAGCTCAAAACGAGCGCTTCTTTCTCTGTGACATGCAAGTAACCAACTCCCACCTCAAAATT
MPN002|xdj1(+)
MPN002 xdj1
+
GTTGGACTTTGACTTGGAAGACACACTTCTTAGACGTCATTCGATCAAGCAAGCCTTCTTAAAGGGCAAG
MPN003|gyrB(+)
MPN003 gyrB
+
ACGGATGAAAAGATTACCCGCGATGACATCTGTGAAGGGTTAACGGCCATTATCTCAATTAAGCACCCCA
MPN004|gyrA(+)
MPN004 gyrA
+
ACGCTTCGGGTTAGATGAAATCCAAGCACGGGCGGTTCTGGACATGCGTTTACGTAGCTTAAGTGTCTTG
MPN005|serS(+)
MPN005 serS
+
CTAGAGGTGCAACTAGCCAACCTCCATGCCAACGAAATCTTCACGGAGGGTGAACTCCCCAAATACTATA
MPN006|-(+)
MPN006 -
+
GTATGCCCGACTTTACCTTTATTGTTGATTGTGACTTTGAGACTGCTTTAAACCGGATGGCCAAACGCGG
MPN007|holB(+)
MPN007 holB
+
AAGCGACCCAGTTACCGTTCCAAGTGGACAGTAAGGACCAGGCGATTCTCAAAAGTTTCTTTAGTGTAGA
MPN008|trmE(+)
MPN008 trmE
+
ATCAAGATAAAGCGATAGTATCCGCCATTAAAGGCAGTACCCGCGACATTGTTGAGGGTGACTTTGCTCT
MPN009|yabD(+)
MPN009 yabD
+
TAAGTGAAACCGATTCGCCTTATTTAGCACCAGTACCTTTTCGGGGCAAAACTAATTGACCGGAATGCGT
MPN010|-(+)
MPN010 -
+
TGGCTTACTCGCCTTCGCTTAACGACATTAAGAGCATTTTGAACAAATATACCTCTAAGGACTATGAGTT
MPN011|-(-)
MPN011 -
-
TTCAACATGACATACAAAGGCATTAGCGATGTTTCAGTTAAAGCCAAGTTGAACCATACTCTCACATGAA
MPN012|-(-)
MPN012 -
-
AAGACAGGGGAAGGCGTTGACACAGAATGAATTGAGTTCCCTGTTTCACTTAGTTGATCATTGCAAGGCA
MPN013|-(+)
MPN013 -
+
TAAAGGCCCAAAGGAACCAGGTGGTCCTGAAGAGCCAAATGGTCCGGATAAACCAGAAGATCCTAAAGAT
MPN014|dnaE(+)
MPN014 dnaE
+
CACCGCAACCTGAAGTATAGATGTCCAATGCAGTACCTCACTAAAAGGGGCTTTAACTTACAAGACCTCT
MPN015|-(-)
MPN015 -
-
TCGAGGATGCTGCTGGTGCTAGGGCACTAACCAAAATGTGTCCTGACTTAAACCTACCAAGGGTAATTAT
MPN016|rimK(-)
MPN016 rimK
-
TTAAGCGGGCTAACTGAACAGATCATTGTGCAGCAATACATTGCCACTTCTAATAGTGAAGCGGTCAGGG
MPN017|mtd1(-)
MPN017 mtd1
-
TGGTGGCGGGCCGATCTTTCACTATTTAAAGGAAACGGGTCATCAGGTGGTGGGATGTGACAAGCATACC
MPN018|pmd1(+)
MPN018 pmd1
+
GCTAACAATGGTCAACTTTACCCGTTCCCGCGTGGCCTTGGGTCGGATTAAGGATGTTTTGAATAAACCG
MPN019|msbA(+)
MPN019 msbA
+
AGCTTCGATCTCAATTGCCACGGCCTTTAGTGTGAATAACATTCCCTCCTTTGGGGTGAGTGCGATTAAC
MPN020|yb95(+)
MPN020 yb95
+
AGGAGTGAAGTGAATTCGCGGTTTGGAGGAAAATAAGTTTGGTGGTATTCTGGCTGACGAAATGGGGTTA
688 65 Kbytes .Supplementary data files not provided
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