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Platform GPL9120 Query DataSets for GPL9120
Status Public on Aug 29, 2009
Title IMCAS Streptococcus suis 385K array (MAP01)
Technology type in situ oligonucleotide
Distribution non-commercial
Organism Streptococcus suis
Manufacturer NimbleGen
Manufacture protocol see manufacturer's web site www.nimblegen.com
 
Description Annotation in this record based on NCBI Streptococcus suis 05ZYH33 NC_009442.
 
Submission date Aug 28, 2009
Last update date Aug 29, 2009
Contact name Zuo-Wei Wu
E-mail(s) wuzw@iastate.edu
Organization name Iowa state university
Street address 1113 Veterinary Medicine Bldg
City Ames
State/province IA
ZIP/Postal code 50011
Country USA
 
Samples (18) GSM446433, GSM446434, GSM446435, GSM446436, GSM446437, GSM446438 
Series (1)
GSE17868 Mutation Mapping of Streptococcus suis serotype 2 strains

Data table header descriptions
ID
RANGE_START
LENGTH
GB_RANGE
FORWARD_SEQUENCE
REVERSE_SEQUENCE

Data table
ID RANGE_START LENGTH GB_RANGE FORWARD_SEQUENCE REVERSE_SEQUENCE
1 1 29 NC_009442.1[1..29] ATGAACCAAGAACAACTTTTTTGGCAACG CGTTGCCAAAAAAGTTGTTCTTGGTTCAT
8 8 29 NC_009442.1[8..36] AAGAACAACTTTTTTGGCAACGATTTATT AATAAATCGTTGCCAAAAAAGTTGTTCTT
15 15 29 NC_009442.1[15..43] ACTTTTTTGGCAACGATTTATTGAATTGG CCAATTCAATAAATCGTTGCCAAAAAAGT
22 22 29 NC_009442.1[22..50] TGGCAACGATTTATTGAATTGGCAAAGGT ACCTTTGCCAATTCAATAAATCGTTGCCA
29 29 29 NC_009442.1[29..57] GATTTATTGAATTGGCAAAGGTAAATTTT AAAATTTACCTTTGCCAATTCAATAAATC
36 36 29 NC_009442.1[36..64] TGAATTGGCAAAGGTAAATTTTAAGCCAT ATGGCTTAAAATTTACCTTTGCCAATTCA
43 43 29 NC_009442.1[43..71] GCAAAGGTAAATTTTAAGCCATCTATTTA TAAATAGATGGCTTAAAATTTACCTTTGC
50 50 29 NC_009442.1[50..78] TAAATTTTAAGCCATCTATTTATGATTTT AAAATCATAAATAGATGGCTTAAAATTTA
57 57 29 NC_009442.1[57..85] TAAGCCATCTATTTATGATTTTTATGTCG CGACATAAAAATCATAAATAGATGGCTTA
64 64 29 NC_009442.1[64..92] TCTATTTATGATTTTTATGTCGCTGATGC GCATCAGCGACATAAAAATCATAAATAGA
71 71 29 NC_009442.1[71..99] ATGATTTTTATGTCGCTGATGCAAAATTA TAATTTTGCATCAGCGACATAAAAATCAT
78 78 29 NC_009442.1[78..106] TTATGTCGCTGATGCAAAATTACTCGGAA TTCCGAGTAATTTTGCATCAGCGACATAA
85 85 29 NC_009442.1[85..113] GCTGATGCAAAATTACTCGGAATCAACCA TGGTTGATTCCGAGTAATTTTGCATCAGC
92 92 29 NC_009442.1[92..120] CAAAATTACTCGGAATCAACCAGCAAGTT AACTTGCTGGTTGATTCCGAGTAATTTTG
99 99 29 NC_009442.1[99..127] ACTCGGAATCAACCAGCAAGTTGCCAATA TATTGGCAACTTGCTGGTTGATTCCGAGT
106 106 29 NC_009442.1[106..134] ATCAACCAGCAAGTTGCCAATATTTTCTT AAGAAAATATTGGCAACTTGCTGGTTGAT
113 113 29 NC_009442.1[113..141] AGCAAGTTGCCAATATTTTCTTAAATCGT ACGATTTAAGAAAATATTGGCAACTTGCT
120 120 29 NC_009442.1[120..148] TGCCAATATTTTCTTAAATCGTCCATTTA TAAATGGACGATTTAAGAAAATATTGGCA
127 127 29 NC_009442.1[127..155] ATTTTCTTAAATCGTCCATTTAAAAAAGA TCTTTTTTAAATGGACGATTTAAGAAAAT
134 134 29 NC_009442.1[134..162] TAAATCGTCCATTTAAAAAAGATTTCTGG CCAGAAATCTTTTTTAAATGGACGATTTA

Total number of rows: 149735

Table truncated, full table size 15318 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL9120_2007-02-02_CSB_S_SUIS_MAP01.ndf.gz 10.5 Mb (ftp)(http) NDF

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