|
| Status |
Public on Dec 05, 2019 |
| Title |
RNA-seq and Term-seq of Methanococcus maripaludis wild-type strain S2 and aCPSF1 depletion strain ▽aCPSF1 |
| Organism |
Methanococcus maripaludis |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Using the high-throughput strand-specific RNA-seq, we performed differential transcriptome analysis between strains S2 and ▽aCPSF1
Using the Term-seq method, we meatured the RNA 3'-end of strains S2 and ▽aCPSF1
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| |
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| Overall design |
Triplicates for RNA-seq and duplicates for Term-seq on each strain.
contributor: Novegene
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| |
|
| Contributor(s) |
Yue L, Li J |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Dec 03, 2019 |
| Last update date |
Dec 06, 2019 |
| Contact name |
Lei Yue |
| E-mail(s) |
yuelei14@mails.ucas.edu.cn
|
| Organization name |
Chinese academy of science
|
| Department |
Institute if Microbiology
|
| Lab |
Anaerobes research group
|
| Street address |
NO.1 Beichen West Road, Chaoyang District
|
| City |
Beijing |
| ZIP/Postal code |
100101 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL27854 |
HiSeq X Ten (Methanococcus maripaludis) |
|
| Samples (10)
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|
| Relations |
| BioProject |
PRJNA593424 |
| SRA |
SRP234689 |
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