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Series GSE222755 Query DataSets for GSE222755
Status Public on May 03, 2023
Title Survey of microbiota composition differences between obese subjects before and after Lactiplantibacillus plantarum probiotic treatment
Organism Homo sapiens
Experiment type Other
Summary The study evaluates the effect of Lactiplantibacillus plantarum IMC 510® supplementation on anthropometric and biochemical parameters, GM composition and gastrointestinal and general symptoms of overweight/obese subjects.
 
Overall design Total DNA was extracted from the stool of the patients, amplified to collect amplicons of variable V3–V4 regions (primers 341F and 805R) of the bacterial 16s rRNA gene and sequenced with MiSeq (2x300bp) Illumina platform.
 
Contributor(s) Ramazzotti M, Amedei A
Citation(s) 37125045
Submission date Jan 12, 2023
Last update date May 03, 2023
Contact name Matteo Ramazzotti
E-mail(s) matteo.ramazzotti@unifi.it
Organization name University of Florence
Department Experimental and Clinical Biomedical Sciences
Street address viale Morgagni 50
City Firenze
ZIP/Postal code 50134
Country Italy
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (68)
GSM6930716 Microbiota of Stool from patient SYN_1 PRE treatment [SF1]
GSM6930717 Microbiota of Stool from patient SYN_8 POST treatment [SF48]
GSM6930718 Microbiota of Stool from patient SYN_11 PRE treatment [SF11]
Relations
BioProject PRJNA923325

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE222755_dna-sequences.fasta.gz 333.5 Kb (ftp)(http) FASTA
GSE222755_feature_table.csv.gz 164.0 Kb (ftp)(http) CSV
GSE222755_taxonomy.tsv.gz 156.8 Kb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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