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Series GSE227677 Query DataSets for GSE227677
Status Public on Sep 27, 2023
Title The phage-encoded protein PIT2 impacts bacterial quorum sensing in Pseudomonas aeruginosa by direct interaction with LasR
Organism Pseudomonas aeruginosa
Experiment type Expression profiling by high throughput sequencing
Summary Quorum sensing (QS) is the cell density-dependent virulence factor regulator in Pseudomonas aeruginosa. Here, we elucidate PIT2, a phage-encoded inhibitor of the QS regulator LasR, derived from the lytic Pseudomonas phage LMA2. PIT2 inhibits the effectors PrpL and LasA of the type 2 secretion system of P. aeruginosa and attenuates bacterial virulence towards HeLa cells and in Galleria mellonella. Using RNAseq-based differential gene expression analysis, the effect of PIT2 on the LasR regulatory network was revealed. Moreover, the specific interaction between LasR and PIT2 was determined. These data expand our knowledge on phage-encoded modulators of the bacterial metabolism, as this examples an anti-virulence protein derived from a lytic phage. From an applied perspective, this phage protein reveals and exploits an interesting anti-virulence target in P. aeruginosa. As such, it lays the foundation for a new phage-inspired anti-virulence strategy to combat multidrug resistant pathogens and opens the door for SynBio applications.
 
Overall design The transcriptional landscape of cells expressing pit2 was compared to a control, a PAO1 strain harboring an empty construct.
 
Contributor(s) Schroven K, Putzeys L, Swinnen A, Hendrix H, Paeshuyse J, Lavigne R
Citation(s) 37736037
Submission date Mar 19, 2023
Last update date Sep 28, 2023
Contact name Rob Lavigne
E-mail(s) rob.lavigne@kuleuven.be
Organization name KU Leuven
Department Biosystems
Lab Laboratory of Gene Technology
Street address Kasteelpark Arenberg 21
City Leuven
ZIP/Postal code 3001
Country Belgium
 
Platforms (1)
GPL26913 Illumina NovaSeq 6000 (Pseudomonas aeruginosa)
Samples (12)
GSM7105073 PAO1_empty_NI_1
GSM7105074 PAO1_empty_NI_2
GSM7105075 PAO1_empty_NI_3
Relations
BioProject PRJNA946327

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE227677_RAW.tar 720.0 Kb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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