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| Status |
Public on Mar 13, 2024 |
| Title |
Refining the transcriptional maps of Pseudomonas aeruginosa phages using ONT-cappable-seq |
| Organism |
Pseudomonas aeruginosa |
| Experiment type |
Other
Expression profiling by high throughput sequencing
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| Summary |
The global transcriptional profiles of Pseudomonas aeruginosa phages LUZ19, LUZ24, YuA, PAK_P3, 14-1 and phiKZ was obtained using the long read RNA sequencing technique ONT-cappable-seq. Using this approach we obtained a comprehensive genome-wide map of viral transcription start sites, terminators and transcription units.
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| Overall design |
Full-length transcriptional profiling of P. aeruginosa infected with different phages (LUZ19, LUZ24, YuA, PAK_P3, 14-1, phiKZ) using ONT-cappable-seq
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| Contributor(s) |
Putzeys L, Wicke L, Boon M, Lavigne R |
| Citation(s) |
38444699 |
| Submission date |
May 04, 2023 |
| Last update date |
Mar 14, 2024 |
| Contact name |
Rob Lavigne |
| E-mail(s) |
rob.lavigne@kuleuven.be
|
| Organization name |
KU Leuven
|
| Department |
Biosystems
|
| Lab |
Laboratory of Gene Technology
|
| Street address |
Kasteelpark Arenberg 21
|
| City |
Leuven |
| ZIP/Postal code |
3001 |
| Country |
Belgium |
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| Platforms (1) |
| GPL31946 |
PromethION (Pseudomonas aeruginosa) |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA967321 |
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