|
| Status |
Public on Jun 09, 2016 |
| Title |
Characterization of the Neisseria gonorrhoeae Iron and Fur Regulatory Network |
| Organism |
Neisseria gonorrhoeae |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
In this study wild-type, fur mutant, and complemented fur mutant strains of the human pathogen Neisseria gonorrhoeae F62 were grown under high (100 uM iron) or low (100 uM desferal) iron conditions to identify genes whose expression was regulated by iron and/or Fur
|
| |
|
| Overall design |
Examination of each of three strains under two conditions by RNA-seq
|
| |
|
| Contributor(s) |
McClure R, Nudel K, Genco CA |
| Citation(s) |
27246574 |
| Submission date |
Jun 08, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Caroline Attardo Genco |
| E-mail(s) |
caroline.genco@tufts.edu
|
| Organization name |
Tufts University
|
| Street address |
136 Harrison Ave
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02111 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL20721 |
Illumina Genome Analyzer IIx (Neisseria gonorrhoeae) |
|
| Samples (10)
|
| GSM2194183 |
Wild-type Iron-Deplete (Replicate 2) |
| GSM2194184 |
Fur mutant Iron-Replete (Replicate 1) |
| GSM2194185 |
Fur mutant Iron-Deplete (Replicate 1) |
| GSM2194186 |
Fur mutant Iron-Deplete (Replicate 2) |
| GSM2194187 |
Comp. Fur Mutant Iron-Replete (Replicate 1) |
| GSM2194188 |
Comp. Fur Mutant Iron-Replete (Replicate 2) |
| GSM2194189 |
Comp. Fur Mutant Iron-Deplete (Replicate 1) |
|
| Relations |
| BioProject |
PRJNA325006 |
| SRA |
SRP076306 |
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