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| Status |
Public on Jun 13, 2017 |
| Title |
Transcriptome profiling of Propionibacterium freudenreichii strains associated with different anti-inflammatory properties. |
| Organism |
Propionibacterium freudenreichii |
| Experiment type |
Expression profiling by array
|
| Summary |
Propionibacterium freudenreichii, a dairy starter, reaches a population close to 10^9 propionibacteria per gram of Swiss-type cheese at the time of consumption.
Also consumed as a probiotic, it revealed strain-dependent anti-inflammatory properties mediated by proteins inducing IL-10 in leukocytes.
Here, strains with varied anti-inflammatory potentials were compared in terms of transcriptome profiles.
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| Overall design |
Eight strains were analyzed in one growth condition. After visual quality check based on the distribution of probe intensities, most strains were represented by 2 biological replicates (1 biological replicate for one strain, and 3 biological replicates for two strains).
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| Contributor(s) |
Deutsch S, Falentin H, Burati J, Loux V, Nicolas P |
| Citation(s) |
28406170 |
| Submission date |
Oct 03, 2016 |
| Last update date |
Jun 15, 2017 |
| Contact name |
Pierre Nicolas |
| E-mail(s) |
pierre.nicolas@inrae.fr
|
| Phone |
+33-1-3465-2894
|
| Organization name |
INRAE - Université Paris-Saclay
|
| Lab |
MaIAGE
|
| Street address |
INRAE - Domaine de Vilvert
|
| City |
Jouy-en-Josas |
| ZIP/Postal code |
F-78350 |
| Country |
France |
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| Platforms (1) |
| GPL22522 |
Custom pangenomic 4 X 72 K Nimblegen array (eight strains of Propionibacterium freudenreichii) |
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| Samples (17)
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| Relations |
| BioProject |
PRJNA345221 |
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