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Series GSE87852 Query DataSets for GSE87852
Status Public on Oct 03, 2018
Title Global transcriptional analysis of Campylobacter jejuni NCTC 11168 after inactivation of flagella biosynthesis regulator FlhF
Organism Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Experiment type Expression profiling by array
Summary Campylobacter jejuni produces a single flagellum on one or both poles of the cell, the polar flagella not only confer the bacterium darting motility but also involved in its virulence and metabolic processes. FlhF is a lately defined flagella biosynthesis regulator, but how it regulates flagella assembly isn’t clear at present. Previous research had indicated FlhF was associated with gene expression, to understanding its role in flagella system and its correlation with C. jejuni virulence, the global gene expression profiles of C. jejuni NCTC 11168 after inactivation of FlhF was analyzed. Transcriptome analysis revealed that ten genes were significantly differentially expressed with 6 down-regulated and 4 up-regulated, these genes are involved in diverse cellular functions including bacterial chemotaxis, flagellar assembly and two-component system, significance analysis revealed that the pathway of flagellar assembly was remarkable affected. Further studies were focused on the flagella system, FlhF was found play a global role as 63% (41/65) of the flagella genes were down-regulated, it influences flagella gene transcription from the early stage, this effect persists during the synthesis process and has a remarkable impact on the late part. The results above expand our cognition of this regulator, and also helpful for comprehensively and systematically reveal its role in flagella system.
 
Overall design Gene expression profiles of C. jejuni strains were measured after grown in MH broth for 20h. Three biological replicates for broth C. jejuni NCTC 11168 (WT) and flhF mutant.
 
Contributor(s) Ren F, Wang N, Huang J, Jiao X
Citation(s) 29458860, 30348090
Submission date Oct 11, 2016
Last update date Oct 29, 2018
Contact name Fangzhe Ren
E-mail(s) rfz1989@126.com
Organization name Yangzhou university
Lab Jiangsu Key Lab of Zoonosis
Street address East Wenhui Road No.12
City Yangzhou
State/province Jiangsu
ZIP/Postal code 225009
Country China
 
Platforms (1)
GPL22549 Agilent-061768 Campylobacter jejuni microarray (Probe name version)
Samples (6)
GSM2341924 Cj11168_WT_Rep1
GSM2341925 Cj11168_WT_Rep2
GSM2341926 Cj11168_WT_Rep3
Relations
BioProject PRJNA347860

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Supplementary file Size Download File type/resource
GSE87852_RAW.tar 12.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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