txid13689[Organism:noexp] - Assembly

Warning: The NCBI web site requires JavaScript to function. more...

Taxonomy

Sphingomonas paucimobilis

Sphingomonas paucimobilis is a species of a-proteobacteria in the family Sphingomonadaceae.

Taxonomy ID: 13689

Genomes

Search results

Items: 18

Filters activated: Latest, Exclude anomalous. Clear all to show 28 items.

Select item 88184111.

ASM1602709v1

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Infraspecific name:: Strain: FDAARGOS_908

Submitter:: US Food and Drug Administration

Date:: 2020/12/14

Assembly level:: Complete Genome

Genome representation:: full

RefSeq category:: representative genome

Relation to type material:: assembly from type material

GenBank assembly accession:: GCA_016027095.1 (latest)

RefSeq assembly accession:: GCF_016027095.1 (latest)

IDs:: 8818411 [UID] 23870678 [GenBank] 23949208 [RefSeq]

Select item 88192712.

ASM1602843v1

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Infraspecific name:: Strain: FDAARGOS_881

Submitter:: US Food and Drug Administration

Date:: 2020/12/14

Assembly level:: Complete Genome

Genome representation:: full

Relation to type material:: assembly from synonym type material

GenBank assembly accession:: GCA_016028435.1 (latest)

RefSeq assembly accession:: GCF_016028435.1 (latest)

IDs:: 8819271 [UID] 23872038 [GenBank] 23950928 [RefSeq]

Select item 22780313.

ASM331479v2

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Infraspecific name:: Strain: AIMST S2

Submitter:: AIMST University

Date:: 2019/02/19

Assembly level:: Complete Genome

Genome representation:: full

GenBank assembly accession:: GCA_003314795.2 (latest)

RefSeq assembly accession:: GCF_003314795.2 (latest)

IDs:: 2278031 [UID] 8550538 [GenBank] 8557858 [RefSeq]

Select item 93072614.

ASM1691954v1

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Infraspecific name:: Strain: ZJSH1

Submitter:: Zhejiang sci-tech university

Date:: 2021/02/23

Assembly level:: Complete Genome

Genome representation:: full

GenBank assembly accession:: GCA_016919545.1 (latest)

RefSeq assembly accession:: GCF_016919545.1 (latest)

IDs:: 9307261 [UID] 25054888 [GenBank] 25122008 [RefSeq]

Select item 78672215.

ASM1416995v1

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Infraspecific name:: Strain: Kira

Submitter:: Keio University

Date:: 2020/07/20

Assembly level:: Complete Genome

Genome representation:: full

GenBank assembly accession:: GCA_014169955.1 (latest)

RefSeq assembly accession:: GCF_014169955.1 (latest)

IDs:: 7867221 [UID] 21554708 [GenBank] 21580058 [RefSeq]

Select item 129639016.

ASM2371580v1

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Infraspecific name:: Strain: MSL 047.2

Submitter:: Jet Propulsion Laboratory

Date:: 2022/06/13

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_023715805.1 (latest)

RefSeq assembly accession:: GCF_023715805.1 (latest)

IDs:: 12963901 [UID] 33855018 [GenBank] 33891548 [RefSeq]

Select item 3508917.

ASM102957v1

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Infraspecific name:: Strain: LCT-SP1

Submitter:: Majorbio Bio-pharm Technology Co., Ltd.

Date:: 2015/06/18

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_001029575.1 (latest)

RefSeq assembly accession:: GCF_001029575.1 (latest)

IDs:: 350891 [UID] 1819238 [GenBank] 1819658 [RefSeq]

Select item 164360418.

asu_sph5_1.0

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Infraspecific name:: Strain: sph5

Submitter:: Arizona State University

Date:: 2023/04/14

Assembly level:: Scaffold

Genome representation:: full

GenBank assembly accession:: GCA_029746875.1 (latest)

RefSeq assembly accession:: GCF_029746875.1 (latest)

IDs:: 16436041 [UID] 42143278 [GenBank] 42168768 [RefSeq]

Select item 70785819.

ASM1300274v1

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Infraspecific name:: Strain: FKI-L5-BR-P1

Submitter:: Jet Propulsion Laboratory, California Institute of Technology

Date:: 2020/05/09

Assembly level:: Scaffold

Genome representation:: full

GenBank assembly accession:: GCA_013002745.1 (latest)

RefSeq assembly accession:: GCF_013002745.1 (latest)

IDs:: 7078581 [UID] 19469478 [GenBank] 19474838 [RefSeq]

Select item 184769110.

42650_F02

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Infraspecific name:: Strain: NCTC11030

Submitter:: SC

Date:: 2018/08/01

Assembly level:: Contig

Genome representation:: full

Relation to type material:: assembly from type material

GenBank assembly accession:: GCA_900457515.1 (latest)

RefSeq assembly accession:: GCF_900457515.1 (suppressed)

Excluded from RefSeq:: many frameshifted proteins

IDs:: 1847691 [UID] 6993228 [GenBank] 8245718 [RefSeq]

Select item 2158561111.

ASM3694632v1

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Submitter:: UNESP-FCAV

Date:: 2024/03/01

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_036946325.1 (latest)

RefSeq assembly accession:: n/a

Excluded from RefSeq:: derived from metagenome

IDs:: 21585611 [UID] 54339008 [GenBank]

Select item 2229252112.

ERR7163068_maxbin2_24

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Submitter:: EMG

Date:: 2024/04/07

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_964022725.1 (latest)

RefSeq assembly accession:: GCF_964022725.1 (latest)

Excluded from RefSeq:: derived from metagenome

IDs:: 22292521 [UID] 56063988 [GenBank] 56119908 [RefSeq]

Select item 1391295113.

SRR7287212_bin.12_metawrap_v1.3.0_MAG

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Submitter:: EMG

Date:: 2022/09/15

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_946477615.1 (latest)

RefSeq assembly accession:: GCF_946477615.1 (latest)

Excluded from RefSeq:: derived from metagenome

IDs:: 13912951 [UID] 36170628 [GenBank] 42129188 [RefSeq]

Select item 1896628114.

ERR9968924_bin.12_MetaWRAP_v1.3_MAG

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Submitter:: EMG

Date:: 2023/10/01

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_963522535.1 (latest)

RefSeq assembly accession:: GCF_963522535.1 (latest)

Excluded from RefSeq:: derived from metagenome

IDs:: 18966281 [UID] 48371458 [GenBank] 48558418 [RefSeq]

Select item 1373286115.

MaE-09apr19-17

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Submitter:: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

Date:: 2022/09/09

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_945860145.1 (latest)

RefSeq assembly accession:: n/a

Excluded from RefSeq:: derived from metagenome, genome length too small

IDs:: 13732861 [UID] 35753668 [GenBank]

Select item 1665320116.

HRS-ES8-bin-109

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Submitter:: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

Date:: 2023/04/24

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_943323535.2 (latest)

RefSeq assembly accession:: n/a

Excluded from RefSeq:: derived from metagenome, genome length too small

IDs:: 16653201 [UID] 42836928 [GenBank]

Select item 1664459117.

HRS-ES7-bin-84

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Submitter:: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

Date:: 2023/04/20

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_943323845.2 (latest)

RefSeq assembly accession:: n/a

Excluded from RefSeq:: derived from metagenome, genome length too small

IDs:: 16644591 [UID] 42819278 [GenBank]

Select item 1664410118.

HRS-ES2-bin-55

Organism:: Sphingomonas paucimobilis (a-proteobacteria)

Submitter:: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

Date:: 2023/04/20

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_943325225.2 (latest)

RefSeq assembly accession:: n/a

Excluded from RefSeq:: derived from metagenome, genome length too small

IDs:: 16644101 [UID] 42818298 [GenBank]

Supplemental Content

Filters: Manage Filters

NCBI Datasets

Download a genome dataset including genome, transcript and protein sequence, annotation and a data report. Learn more

Download Datasets

Genomic Sequence (FASTA)

Annotated features (GFF3)

Sequence and annotation (GBFF)

Transcripts (FASTA)

Protein (FASTA)

Your selected data and a detailed data report will be downloaded as a ZIP file.

Select up to 200 genome assemblies from the search results using the checkboxes next to the assembly names.

Find related data

Search details

Recent activity

Clear Turn Off Turn On

txid13689[Organism:noexp] AND (latest[filter] AND all[filter] NOT... (18)
txid13689[Organism:noexp] AND (latest[filter] AND all[filter] NOT anomalous[filter])
Search

Assembly

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Assembly

Genome Assembly

Result Filters

Organism group

Status

Assembly level

RefSeq category

Exclude

Annotation status

Taxonomy check status

Relation to type material

Assembly type

Sequence release date

Custom date range

Contig N50

Custom range

Scaffold N50